This provides a link to the analyses performed on the Integromics whole exome sequencing (WES), TCGA WES, and targeted sequencing of Integromics cohort (T200). Nozzle reports are available, including MutCV and Oncotator annotated results. Comparison of mutation frequency by CMS are included, as well as waterfall plots and lollipop plots for summary and individual gene analyses. BAM file locations are listed below.
Sequencing Data:
Following are the locations of BAM files and the corresponding sample information of the exome and the T200.1 data
Whole exome:
/rsrch1/bcb/bmbroom/MS14/CRC_MS14/batch3.
T200.1:
/rsrch1/bcb/bmbroom/MS14/CRC_MS14/batch2